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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015884482.1_cds_XP_016438844.1_34466
CDS Infomation

[gene=LOC107764755] [db_xref=GeneID:107764755] [protein=aspartic proteinase nepenthesin-1-like] [protein_id=XP_016438844.1] [location=join(8068..9114,9594..9893)] [gbkey=CDS]
Sequence

ATGGCTTCATCAAACTTTGCCAATTTCACCATGTTTCTTTCTATATCAGTCTTGTTTGTT
AATATTCTGCCAGTGAATTCAACATCAAGGCATGCTTTAATCAACAACCGTAAGGGATTC
AAGGTGAGTCTAAAACATGTTGATTCAGGTGGGAATTTCACCAAATTCGAGCGTTTACAA
CGTGCAATGGCACGAGGGAAATCGAGACTTCAAAGGCTAAACCTAATGGCTAATAATTTG
GTAGCAACAACAGCCAAAGATGACTCTGACATTGTAAAGTCTACAATCCATGCAGGAAAT
GGTGAGTTTCTCATGCAAATATCCATTGGCAGTCCAAGTGAAACCTATAATGCTATAATG
GATACTGGAAGTGACTTGATTTGGACTCAATGCAAGCCTTGTAAAGAGTGTTTTGATCAA
TCCACACCTATTTTTGATCCATCAAAATCATCCACTTTTTCCAAGATTTCGTGTTCTAAC
AAACTTTGTGAAGCATTACCAATGTCATCTTGTGGAGATAGTAGCTGTGAATATATGTAC
ACATATGGTGATTATTCATCAAGTGAAGGTTTTTTAGCTAGTGAAACATTCACTTTTGGC
AAAAATTCCATTCCAAATGTTGCATTTGGATGTGGAAATGACAATCAAGGCAGTGGCTTT
AGTCAAGGTGCAGGTCTAGTTGGGCTAGGAAGAGGTCCATTATCACTTGTTTCTCAACTC
CAAATGCCTAAATTTTCCTATTGTTTAACCTCAATTAATGTTGATGCTAATAACAAAATT
AGCAGCACACTACTTATGGGAACCATAGCAAATGATGATCATTCCAATATAATCACAACT
CCATTAGTGAAAAATCCTTCTCAGCCATCTTTTTATTATCTTTCCTTAGAAGGAATATCA
GTTGGAGATACTCAATTGCCTATCAAGAAATCCACATTTTCACTCAACCAAGATGGCAGT
GGAGGAGTAATAATAGACTCTGGGACAACCATAACATACTTAGAAGAAAGTGCATTTAGT
CTTCTCAAGAAAGAGTTCTCTTCACAGGTAAACCTTCCAGTGGACGACTCCAGCTCAACA
GGACTGGATTTATGTTTCACTTTGCCTTCAAGCACAAACAATATAGAGGTTCCAAAATTG
GTTTTCCATTTTGAAGGTGCAGACTTGGATTTGCCTGCTGATAATTACATGATTGCTGAT
TCAAGTATGGGAGTTGCTTGTTTGGCCATGGGAGGTTCAAGTGGAATGTCTATTTTTGGA
AATGTTCAGCAACAAAATATGCTTGTCATTCATGATCTTAATAAGGAGACTTTATCGTTT
GTACCAACACAATGTGATAAACTGTAG

Peptide Sequence

PEP ID

XP_016438844.1
PEP Infomation

PREDICTED: aspartic proteinase nepenthesin-1-like [Nicotiana tabacum]
Sequence

MASSNFANFTMFLSISVLFVNILPVNSTSRHALINNRKGFKVSLKHVDSGGNFTKFERLQ
RAMARGKSRLQRLNLMANNLVATTAKDDSDIVKSTIHAGNGEFLMQISIGSPSETYNAIM
DTGSDLIWTQCKPCKECFDQSTPIFDPSKSSTFSKISCSNKLCEALPMSSCGDSSCEYMY
TYGDYSSSEGFLASETFTFGKNSIPNVAFGCGNDNQGSGFSQGAGLVGLGRGPLSLVSQL
QMPKFSYCLTSINVDANNKISSTLLMGTIANDDHSNIITTPLVKNPSQPSFYYLSLEGIS
VGDTQLPIKKSTFSLNQDGSGGVIIDSGTTITYLEESAFSLLKKEFSSQVNLPVDDSSST
GLDLCFTLPSSTNNIEVPKLVFHFEGADLDLPADNYMIADSSMGVACLAMGGSSGMSIFG
NVQQQNMLVIHDLNKETLSFVPTQCDKL

Transcript Sequence

Gene sequence data has not been registered.